Publications
2019
- Fuller Z, Berg JJ, Mostafavi H, Sella G, Przeworski M. Measuring "Intolerance to Mutation" in Human Genetics Nature Genetics. DOI: 10.1038/s41588-019-0383-1 [pdf]
- Berg JJ*, Harpak A*, Sinnott-Armstrong N*, Jörgensen AM, Mostafavi H, Field Y, Boyle EA, Zhang X, Racimo F, Pritchard JK, Coop G. Reduced signal for polygenic adaptation of height in UK Biobank eLife. DOI: 10.7554/eLife.39725 [pdf]
- Josephs E, Berg JJ, Ross-Ibarra J, Coop G. Detecting adaptive differentiation in structured populations with genomic data and common gardens Genetics. DOI: 10.1534/genetics.118.301786 [pdf]
2018
- Bilisnki P, Albert PS, Berg JJ, Birchler J, Grote M, Lorant A, Quezada J, Swartz K, Yang J, Ross-Ibarra J. Parallel Altitudinal Clines Reveal Adaptive Evolution of Genome Size in Zea mays PLOS Genetics. DOI: 10.1371/journal.pgen.1007162 [pdf]
- Racimo F, Berg JJ, Pickrell J. Detecting Polygenic Adaptation in Admixture Graphs Genetics. DOI: 10.1101/167551 [pdf]
2015
- Berg JJ, Coop G. A Coalescent Model for a Sweep of a Unique Standing Variant. Genetics. DOI: 10.1534/genetics.115.178962 [pdf]
2014
- Berg JJ, Coop G. A Population Genetic Signal of Polygenic Adaptation. PLOS Genetics. DOI: 10.1371/journal.pgen.1004412 [pdf]
2013
- Martins, TR, Berg JJ, Blinka, S, Rausher, MD, Baum, DA. Precise spatio‐temporal regulation of the anthocyanin biosynthetic pathway leads to petal spot formation in Clarkia gracilis (Onagraceae). New Phytologist. DOI: 10.1111/nph.12062 [pdf]
Unpublished Preprints
2017
- Berg JJ, Zhang X, Coop G. Polygenic Adaptation has Impacted Multiple Anthropometric Traits bioRxiv. DOI: 10.1101/167551 [pdf]
* note: this article has been left unpublished because analyses of an additional dataset after the initial preprint submission caused us to lose faith in the data on which its analyses were based. The Berg, Harpak, Sinnott-Armstrong et al (2019) paper listed above is a successor manuscript which examines these issues in depth. For more, see that paper, as well as the author's note in this preprint.
2019
- Fuller Z, Berg JJ, Mostafavi H, Sella G, Przeworski M. Measuring "Intolerance to Mutation" in Human Genetics Nature Genetics. DOI: 10.1038/s41588-019-0383-1 [pdf]
- Berg JJ*, Harpak A*, Sinnott-Armstrong N*, Jörgensen AM, Mostafavi H, Field Y, Boyle EA, Zhang X, Racimo F, Pritchard JK, Coop G. Reduced signal for polygenic adaptation of height in UK Biobank eLife. DOI: 10.7554/eLife.39725 [pdf]
- Josephs E, Berg JJ, Ross-Ibarra J, Coop G. Detecting adaptive differentiation in structured populations with genomic data and common gardens Genetics. DOI: 10.1534/genetics.118.301786 [pdf]
2018
- Bilisnki P, Albert PS, Berg JJ, Birchler J, Grote M, Lorant A, Quezada J, Swartz K, Yang J, Ross-Ibarra J. Parallel Altitudinal Clines Reveal Adaptive Evolution of Genome Size in Zea mays PLOS Genetics. DOI: 10.1371/journal.pgen.1007162 [pdf]
- Racimo F, Berg JJ, Pickrell J. Detecting Polygenic Adaptation in Admixture Graphs Genetics. DOI: 10.1101/167551 [pdf]
2015
- Berg JJ, Coop G. A Coalescent Model for a Sweep of a Unique Standing Variant. Genetics. DOI: 10.1534/genetics.115.178962 [pdf]
2014
- Berg JJ, Coop G. A Population Genetic Signal of Polygenic Adaptation. PLOS Genetics. DOI: 10.1371/journal.pgen.1004412 [pdf]
2013
- Martins, TR, Berg JJ, Blinka, S, Rausher, MD, Baum, DA. Precise spatio‐temporal regulation of the anthocyanin biosynthetic pathway leads to petal spot formation in Clarkia gracilis (Onagraceae). New Phytologist. DOI: 10.1111/nph.12062 [pdf]
Unpublished Preprints
2017
- Berg JJ, Zhang X, Coop G. Polygenic Adaptation has Impacted Multiple Anthropometric Traits bioRxiv. DOI: 10.1101/167551 [pdf]
* note: this article has been left unpublished because analyses of an additional dataset after the initial preprint submission caused us to lose faith in the data on which its analyses were based. The Berg, Harpak, Sinnott-Armstrong et al (2019) paper listed above is a successor manuscript which examines these issues in depth. For more, see that paper, as well as the author's note in this preprint.